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pymol-mcp
Headless PyMOL for molecular visualization, GROMACS/LAMMPS trajectories and clathrate-hydrate cage analysis, including H-bond networks and order parameters.
Topics: Biology, Medicine and Bioinformatics
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See the repository for installation instructions: https://github.com/wjgoarxiv/pymol-mcp
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Listed in punkpeye/awesome-mcp-servers (MIT)